Segmenter.h

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/*  Copyright (C) 2008 National Institute For Space Research (INPE) - Brazil.
 
    This file is part of the TerraLib - a Framework for building GIS enabled applications.
 
    TerraLib is free software: you can redistribute it and/or modify
    it under the terms of the GNU Lesser General Public License as published by
    the Free Software Foundation, either version 3 of the License,
    or (at your option) any later version.
 
    TerraLib is distributed in the hope that it will be useful,
    but WITHOUT ANY WARRANTY; without even the implied warranty of
    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
    GNU Lesser General Public License for more details.
 
    You should have received a copy of the GNU Lesser General Public License
    along with TerraLib. See COPYING. If not, write to
    TerraLib Team at <terralib-team@terralib.org>.
 */
 
/*!
  \file terralib/rp/Segmenter.h
  \brief Raster segmentation.
 */
 
#ifndef __TERRALIB_RP_INTERNAL_SEGMENTER_H
#define __TERRALIB_RP_INTERNAL_SEGMENTER_H
 
#include "SegmenterStrategyParameters.h"
#include "SegmenterStrategy.h"
#include "SegmenterSegmentsBlock.h"
#include "SegmenterIdsManager.h"
#include "Algorithm.h"
#include "Matrix.h"
#include "Config.h"
#include "../raster/RasterSynchronizer.h"
#include "../common/progress/TaskProgress.h"
 
#include <vector>
#include <string>
#include <map>
#include <memory>
 
namespace te
{
  namespace da
  {
    class DataSource;    
  }
  
  namespace rst
  {
    class Raster;
    class Band;
  }
  
  namespace rp
  {
    /*!
      \class Segmenter
      \brief Raster segmentation.
      \details Raster segmentation following the choosed segmentation
      strategy.
      \note The created label image will be written to the raster instance 
      pointed by m_outRasterPtr (in this case the output band must also be 
      passed by m_outRasterBand ); or written to a new raster instance created 
      inside the given data source pointed by m_outDataSourcePtr (in this case 
      the data set name must be supplied - m_outDataSetName ).      
      \sa te::rp::Segmenter::Parameters For detailed parameters description.
      \sa te::rp::SegmenterStrategy For detailed parameters description.
 
      \ingroup rp_seg
    */
    class TERPEXPORT Segmenter : public Algorithm
    {
      public:
        
        /*!
          \class InputParameters
          \brief Segmenter Input Parameters
         */        
        class TERPEXPORT InputParameters : public AlgorithmInputParameters
        {
          public:
            
            te::rst::Raster const* m_inputRasterPtr; //!< Input raster.
            
            std::vector< unsigned int > m_inputRasterBands; //!< Bands to be processed from the input raster.
            
            std::vector< std::complex< double > > m_inputRasterNoDataValues; //!< A vector of values to be used as input raster no-data values or an empty vector indicating to use the default values from the input raster..
            
            bool m_enableThreadedProcessing; //!< If true, threaded processing will be performed (best with  multi-core or multi-processor systems (default:true).
            
            unsigned int m_maxSegThreads; //!< The maximum number of concurrent segmenter threads (default:0 - automatically found).
            
            bool m_enableBlockProcessing; //!< If true, the original raster will be splitted into small blocks, each one will be segmented independently and the result will be merged (if possible) at the end (default:true).
            
            unsigned int m_maxBlockSize; //!< The input image will be split into blocks with this width for processing, this parameter tells the maximum block lateral size (width or height), the default: 0 - the size will be defined following the current system resources and physical processors number).
            
            unsigned char m_blocksOverlapPercent; //!< The percentage of blocks overlapped area (valid range:0-25, defaul:5).
            
            std::string m_strategyName; //!< The segmenter strategy name see each te::rp::SegmenterStrategyFactory inherited classes documentation for reference (default:RegionGrowingMean).
            
            bool m_enableProgress; //!< Enable/Disable the progress interface (default:false).
            
            bool m_enableRasterCache; //!< Enable/Disable the use of raster data cache (default:true).
            
            InputParameters();
            
            InputParameters( const InputParameters& other );
            
            ~InputParameters();
            
            /*!
              \brief Set specific segmenter strategy parameters.
              \param params The specific segmenter strategy parameters.
            */            
            void setSegStrategyParams( 
              const SegmenterStrategyParameters& segStratParams );
 
            /*!
              \brief Returns a pointer to the internal specific segmenter strategy parameters.
              \return A pointer to the internal specific segmenter strategy parameters, or
              null if no parameters are present.
            */                                
            SegmenterStrategyParameters const* getSegStrategyParams() const;              
            
            //overload
            void reset() ;
            
            //overload
            const Segmenter::InputParameters& operator=( const Segmenter::InputParameters& params );
            
            //overload
            AbstractParameters* clone() const;   
 
            //overload
            bool serialize ( AlgorithmParametersSerializer& serializer ) const;
            
          protected :
            
            /*!
              \brief A pointer to the internal specific segmenter strategy parameters or
              NULL if no parameters are present.
            */               
            std::unique_ptr< SegmenterStrategyParameters > m_segStratParamsPtr;
        };
        
        /*!
          \class OutputParameters
          \brief Segmenter Output Parameters
         */        
        class TERPEXPORT OutputParameters : public AlgorithmOutputParameters
        {
          public:
            
            std::string m_rType; //!< Output raster data source type (as described in te::raster::RasterFactory ).
            
            std::map< std::string, std::string > m_rInfo; //!< The necessary information to create the raster (as described in te::raster::RasterFactory). 
            
            std::unique_ptr< te::rst::Raster > m_outputRasterPtr; //!< A pointer the ge generated output raster (label image).
            
            OutputParameters();
            
            OutputParameters( const OutputParameters& other );
            
            ~OutputParameters();
            
            //overload
            void reset() ;
            
            //overload
            const Segmenter::OutputParameters& operator=( const Segmenter::OutputParameters& params );
            
            //overload
            AbstractParameters* clone() const;   
        };        
 
        Segmenter();
        
        ~Segmenter();
       
        //overload
        bool execute( AlgorithmOutputParameters& outputParams ) ;          
        
        //overload
        void reset() ;        
        
        //overload
        bool initialize( const AlgorithmInputParameters& inputParams ) ;
          
        bool isInitialized() const;
          
      protected :
        
        /*! Segments blocks matrix type definition */
        typedef te::rp::Matrix< SegmenterSegmentsBlock > SegmentsBlocksMatrixT;
        
          /*! 
          \brief The parameters passed to the Segmenter::segmenterthreadEntry method.
        */     
        class SegmenterThreadEntryParams
        {
          public :
            //! The global segmenter input execution parameters.
            Segmenter::InputParameters m_inputParameters;
            
            //! A pointer to the global segmenter input execution parameters (default:0).
            Segmenter::OutputParameters* m_outputParametersPtr;
            
            //! Pointer to the segments blocks matrix (default:0).
            SegmentsBlocksMatrixT* m_segsBlocksMatrixPtr;
            
            //! Pointer to a general global mutex (default:0).
            boost::mutex* m_generalMutexPtr;            
            
            //! Pointer to the input raster synchronizer (default:0).
            te::rst::RasterSynchronizer* m_inputRasterSyncPtr;
 
            //! Pointer to the output raster synchronizer (default:0).
            te::rst::RasterSynchronizer* m_outputRasterSyncPtr;
            
            //! Pointer to the mutex used by the block processed signal (default:0).
            boost::mutex* m_blockProcessedSignalMutexPtr;            
            
            //! Pointer to the abort segmentation flag (default:0).
            bool volatile* m_abortSegmentationFlagPtr;
            
            //! Pointer to the segments Ids manager - (default 0).
            SegmenterIdsManager* m_segmentsIdsManagerPtr;
            
            //! Pointer to a signal to be emited when a segments block was processed (default:0).
            boost::condition_variable* m_blockProcessedSignalPtr;
            
            //! Pointer to the running threads counter - default 0).
            unsigned int volatile* m_runningThreadsCounterPtr;        
            
            //! A vector of input raster bands minimum values.
            std::vector< std::complex< double > > m_inputRasterBandMinValues;
            
            //! A vector of input raster bands maximum values.
            std::vector< std::complex< double > > m_inputRasterBandMaxValues;
            
            //! A vector of values to be used as input raster no-data values.
            std::vector< std::complex< double > > m_inputRasterNoDataValues; 
            
            //! Enable/Disable the segmentation strategy to use its own progress interface (default:false).
            bool m_enableStrategyProgress;
            
            //! The maximum number of input raster cached blocks per-thread.
            unsigned int m_maxInputRasterCachedBlocks;
 
            //! A pointer to a string where the thread error message will be stored.
            std::string* m_threadErrorMessagePtr;
            
            SegmenterThreadEntryParams();
            
            ~SegmenterThreadEntryParams();
        };      
        
        bool m_instanceInitialized; //"< Is this instance already initialized ?
        
        Segmenter::InputParameters m_inputParameters; //!< Segmenter execution parameters.
        
        /*! 
          \brief Calc the best sub-image block size for each thread to
          process.
          \param minBlockPixels The minimun allowed pixels number for each block (expanded block).
          \param maxBlockPixels The maximum allowed pixels number for each block (expanded block).
          \param blocksHOverlapSize The blocks horizontal overlap size (number of columns).
          \param blocksVOverlapSize The blocks vertical overlap size (number of rows).
          \param nonExpandedBlockWidth The calculated non-expanded block width (non-expanded block).
          \param nonExpandedBlockHeight The calculated non-expanded block height (non-expanded block).
          \param expandedBlockWidth The calculated expanded block width (non-expanded block).
          \param expandedBlockHeight The calculated expanded block height (non-expanded block).          
          \return true if OK, false on errors.
        */                
        bool calcBestBlockSize( 
          const unsigned int minExapandedBlockPixels,
          const unsigned int maxExapandedBlockPixels, 
          unsigned int& blocksHOverlapSize,
          unsigned int& blocksVOverlapSize, 
          unsigned int& nonExpandedBlockWidth,
          unsigned int& nonExpandedBlockHeight,
          unsigned int& expandedBlockWidth,
          unsigned int& expandedBlockHeight ) const;        
          
        /*! 
          \brief Segmenter thread entry.
          \param paramsPtr A pointer to the segmenter thread parameters.
        */      
        static void segmenterThreadEntry(SegmenterThreadEntryParams* paramsPtr);
        
        /*! 
          \brief Generate the horizontal cutOff prifles for the entire image..
          \param profileCenter The profile center line.
          \param inRaster The input raster.
          \param inRasterBands The input raster bands.
          \param pixelNeighborhoodSize The pixel neighborhood size over the line transverse to each tile line.
          \param tileNeighborhoodSize The buffer size around each tile.
          \param profileAntiSmoothingFactor A positive profile anti-smoothing factor.
          \param profile The generated profile (each element is a inRaster line index ).
          \return true if OK, false on errors.
        */                
        bool genImageHCutOffProfile( const unsigned int profileCenter,
          const te::rst::Raster& inRaster,
          const std::vector< unsigned int >& inRasterBands,
          const unsigned int pixelNeighborhoodSize,
          const unsigned int tileNeighborhoodSize,
          const unsigned int profileAntiSmoothingFactor,
          std::vector< unsigned int>& profile ) const;  
          
        /*! 
          \brief Generate the vertical cutOff prifles for the entire image..
          \param profileCenter The profile center column.
          \param inRaster The input raster.
          \param inRasterBands The input raster bands.
          \param pixelNeighborhoodSize The pixel neighborhood size over the line transverse to each tile line.
          \param tileNeighborhoodSize The buffer size around each tile.
          \param profileAntiSmoothingFactor A positive profile anti-smoothing factor.
          \param profile The generated profile (each element is a inRaster column index )
          \return true if OK, false on errors.
        */                
        bool genImageVCutOffProfile( const unsigned int profileCenter,
          const te::rst::Raster& inRaster,
          const std::vector< unsigned int >& inRasterBands,
          const unsigned int pixelNeighborhoodSize,
          const unsigned int tileNeighborhoodSize,
          const unsigned int profileAntiSmoothingFactor,
          std::vector< unsigned int>& profile ) const;          
          
        /*! 
          \brief Update the block cutOff profiles using the full image profiles.
          \param imageVerticalProfiles The generated horizontal profiles (empty profiles also will be accepted).
          \param horizontalProfiles The generated vertical profiles (empty profiles also will be accepted).
          \param segmentsBlock The block to update.
          \return true if OK, false on errors.
        */           
        bool updateBlockCutOffProfiles( 
          const std::vector< std::vector< unsigned int> >& imageHorizontalProfiles,
          const std::vector< std::vector< unsigned int> >& imageVerticalProfiles,
          SegmenterSegmentsBlock& segmentsBlock ) const;    
          
        bool createCutOffLinesTiff(  
          const std::vector< std::vector< unsigned int> >& imageHorizontalProfiles,
          const std::vector< unsigned int >& imageHorizontalProfilesCenterLines,
          const std::vector< std::vector< unsigned int> >& imageVerticalProfiles,
          const std::vector< unsigned int >& imageVerticalProfilesCenterLines,
          const std::string& filename );
    };
 
  } // end namespace rp
}   // end namespace te
 
#endif